Saccharomyces cerevisiae Reference Assembly Panel Database (ScRAPdb)
Home
Strains
Phylogeny
Nuclear tree
Mitochondrial tree
Pangenome
Assembly quality assessment
Average nucleotide identity
Genome content variation
Pantranscriptome
Single gene query
Multi-gene query
Principal component analysis
Pairwise strain correlation
Panproteome
Single gene query
Multi-gene query
Principal component analysis
Pairwise strain correlation
Panphenome
Phenotype query
Principal component analysis
Pairwise strain correlation
Pairwise trait correlation
Tools
JBrowse
Synteny
BLAST
Download
Help
Strain collection
ScRAPdb strains with matched transcriptome data
1002ScGP strains with matched transcriptome data
A.
Principal component analysis of RNA-seq data (log2(TPM+1))
Colored and shaped by:
Ecology
Ploidy
Aneuploidy